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1.
Artigo em Inglês | MEDLINE | ID: mdl-34728403

RESUMO

The study was designed to identify the types of mitogen-activated protein kinases (MAPKs) in erythrocytes and liver tissues of river lamprey Lampetra fluviatilis and monitor the changes in protein expression levels of found enzymes on the course of prespawning starvation (from November to the end of May). Immunoreactivity of the native and phosphorylated forms of ERK1/2, JNK and p38 was examined in the cytosolic and membrane cell fractions. Both lamprey erythrocytes and liver were found to highly express ERK1/2 and JNK, whereas only trace amounts of p38 were revealed in hepatic tissues. ERK1/2 was identified in cytosolic and membrane fractions, whereas JNK and p38 were predominantly cytosolic enzymes. Total cellular amounts of ERK1/2 and phospho-ERK1/2 in both erythrocytes and liver tissues appeared to be relatively stable on the course of prespawning starvation. However, before spawning ERK1/2 translocated from cytosol to membranes, with partial decline of its cytoplasmic expression being compensated by increases in membrane-bound pool. Immunoreactivity of cytoplasmic JNK, phospho-JNK and p38 were stable from November to March, but sharply decreased before spawning exhibiting almost negligible levels in May, which suggests the depletion of their cellular fractions. Most probably, ERK1/2 plays more important role in mediating adaptive responses of erythrocytes and liver tissues to conditions of natural starvation and maintenance of cell viability before spawning and death of animals in May.


Assuntos
Proteínas de Peixes/metabolismo , Lampreias/metabolismo , Fígado/enzimologia , Proteínas Quinases Ativadas por Mitógeno/metabolismo , Animais , Eritrócitos/enzimologia , Feminino , Proteínas de Peixes/sangue , Lampreias/sangue , Masculino , Proteínas Quinases Ativadas por Mitógeno/sangue , Reprodução , Estações do Ano , Inanição/sangue , Inanição/enzimologia , Frações Subcelulares/enzimologia
2.
Sci Rep ; 11(1): 17794, 2021 09 07.
Artigo em Inglês | MEDLINE | ID: mdl-34493758

RESUMO

The metazoan 70-kDa heat shock protein (HSP70) family contains several members localized in different subcellular compartments. The cytosolic members have been classified into inducible HSP70s and constitutive heat shock cognates (HSC70s), but their distinction and evolutionary relationship remain unclear because of occasional reports of "constitutive HSP70s" and the lack of cross-phylum comparisons. Here we provide novel insights into the evolution of these important molecular chaperones. Phylogenetic analyses of 125 full-length HSP70s from a broad range of phyla revealed an ancient duplication that gave rise to two lineages from which all metazoan cytosolic HSP70s descend. One lineage (A) contains a relatively small number of genes from many invertebrate phyla, none of which have been shown to be constitutively expressed (i.e., either inducible or unknown). The other lineage (B) included both inducible and constitutive genes from diverse phyla. Species-specific duplications are present in both lineages, and Lineage B contains well-supported phylum-specific clades for Platyhelminthes, Rotifera, Nematoda, Porifera/Cnidaria, and Chordata. Some genes in Lineage B have likely independently acquired inducibility, which may explain the sporadic distribution of "HSP70" or "HSC70" in previous phylogenetic analyses. Consistent with the diversification history within each group, inducible members show lower purifying selection pressure compared to constitutive members. These results illustrate the evolutionary history of the HSP70 family, encouraging us to propose a new nomenclature: "HSP70 + subcellular localization + linage + copy number in the organism + inducible or constitutive, if known." e.g., HSP70cA1i for cytosolic Lineage A, copy 1, inducible.


Assuntos
Evolução Molecular , Proteínas de Choque Térmico HSP70/genética , Invertebrados/genética , Família Multigênica , Vertebrados/genética , Sequência de Aminoácidos , Substituição de Aminoácidos , Animais , Sequência Consenso , Filogenia , Alinhamento de Sequência , Homologia de Sequência de Aminoácidos , Especificidade da Espécie , Frações Subcelulares/enzimologia
3.
Elife ; 102021 05 14.
Artigo em Inglês | MEDLINE | ID: mdl-33988507

RESUMO

The human kinome comprises 538 kinases playing essential functions by catalyzing protein phosphorylation. Annotation of subcellular distribution of the kinome greatly facilitates investigation of normal and disease mechanisms. Here, we present Kinome Atlas (KA), an image-based map of the kinome annotated to 10 cellular compartments. 456 epitope-tagged kinases, representing 85% of the human kinome, were expressed in HeLa cells and imaged by immunofluorescent microscopy under a similar condition. KA revealed kinase family-enriched subcellular localizations and discovered a collection of new kinase localizations at mitochondria, plasma membrane, extracellular space, and other structures. Furthermore, KA demonstrated the role of liquid-liquid phase separation in formation of kinase condensates. Identification of MOK as a mitochondrial kinase revealed its function in cristae dynamics, respiration, and oxidative stress response. Although limited by possible mislocalization due to overexpression or epitope tagging, this subcellular map of the kinome can be used to refine regulatory mechanisms involving protein phosphorylation.


Assuntos
Mitocôndrias/enzimologia , Proteínas Quinases , Frações Subcelulares/enzimologia , Epitopos , Células HeLa , Humanos , Microscopia de Fluorescência , Organelas , Fosforilação
4.
Carcinogenesis ; 42(8): 1026-1036, 2021 08 19.
Artigo em Inglês | MEDLINE | ID: mdl-33999989

RESUMO

Hepatocellular carcinoma (HCC) presents with a high treatment resistance and poor prognosis. Early diagnosis and preventive approaches such as chemoprevention are essential for the HCC control. Therefore, we evaluated the chemopreventive effects of butyrate-containing structured lipids (STLs) administered during the promotion stage of hepatocarcinogenesis in rats submitted to the 'resistant hepatocyte' (RH) model. Administration of butyrate-containing STLs inhibited the incidence and mean number of visible hepatic nodules per rat and reduced the number and area of glutathione S-transferase placental form-positive (GST-P+) preneoplastic focal lesions in the livers. This was accompanied by the induction of apoptosis and an increased level of hepatic butyric acid. Treatment with butyrate-containing STLs resulted in increased histone H3 lysine 9 (H3K9) acetylation, reduction of total histone deacetylase (HDAC) activity, and lower levels of HDAC4 and HDAC6 proteins. The chemopreventive effect of butyrate-containing STLs was also associated with the increased nuclear compartmentalization of p53 protein and reduced expression of the Bcl-2 protein. In addition, rats treated with butyrate-containing STLs showed decreased DNA damage and telomerase activity in the livers. These results demonstrate that the suppressive activity of butyrate-containing STLs is associated with inhibition of elevated during hepatocarcinogenesis chromatin-modifying proteins HDAC4 and HDAC6, subcellular redistribution of the p53 protein, and decreased DNA damage and telomerase activity.


Assuntos
Butiratos/metabolismo , Dano ao DNA , Glutationa S-Transferase pi/metabolismo , Desacetilase 6 de Histona/metabolismo , Histona Desacetilases/metabolismo , Lipídeos/química , Neoplasias Hepáticas Experimentais/patologia , Telomerase/metabolismo , Animais , Carcinogênese , Caspase 3/metabolismo , Neoplasias Hepáticas Experimentais/enzimologia , Neoplasias Hepáticas Experimentais/genética , Masculino , Proteínas Proto-Oncogênicas c-bcl-2/metabolismo , Ratos , Ratos Wistar , Frações Subcelulares/enzimologia , Proteína Supressora de Tumor p53/metabolismo , Ácido alfa-Linolênico/metabolismo
5.
J Cell Biochem ; 120(12): 19730-19737, 2019 12.
Artigo em Inglês | MEDLINE | ID: mdl-31297896

RESUMO

Tyrosine hydroxylase (TH) is the key enzyme that controls the rate of synthesis of the catecholamines. SH-SY5Y cells with stable transfections of either human tyrosine hydroxylase isoform 1 (hTH1) or human tyrosine hydroxylase isoform 4 (hTH4) were used to determined the subcellular distribution of TH protein and phosphorylated TH, under basal conditions and after muscarine stimulation. Muscarine was previously shown to increase the phosphorylation of only serine 19 and serine 40 in hTH1 cells. Under basal conditions, the hTH1 and hTH4 proteins, their serine 19 phosphorylated forms and hTH1 phosphorylated at serine 40 were all similarly distributed; with ~80% in the cytosolic fraction, ~20% in the membrane fraction, and less than 1%, or not detectable, in the nuclear fraction. However, hTH4 phosphorylated at serine 71 had a significantly different distribution with ~65% cytosolic and ~35% membrane associated. Muscarine stimulation led to hTH1 being redistributed from the cytosol and nuclear fractions to the membrane fraction and hTH4 being redistributed from the cytosol to the nuclear fraction. These muscarine stimulated redistributions were not due to TH phosphorylation at serine 19, serine 40, or serine 71 and were most likely due to TH binding to proteins whose phosphorylation was increased by muscarine. This is the first study to show a difference in subcellular distribution between two human TH isoforms under basal and stimulated conditions.


Assuntos
Tirosina 3-Mono-Oxigenase/metabolismo , Linhagem Celular , Membrana Celular/enzimologia , Citosol/metabolismo , Humanos , Isoenzimas/metabolismo , Muscarina/farmacologia , Fosforilação , Serina/metabolismo , Frações Subcelulares/enzimologia , Tirosina 3-Mono-Oxigenase/genética
6.
Curr Opin Chem Biol ; 52: 39-46, 2019 10.
Artigo em Inglês | MEDLINE | ID: mdl-31158654

RESUMO

Attaching a functional moiety to a protein is required for a wealth of applications, comprising targeted delivery, controlling of enzyme activity, and prodrug-based therapy. Targeting intracellular processes requires the cellular delivery of the protein. While at first, a stable connection between the protein and the modification is desired, once inside the cell, the conjugate might be cleaved again to restore or activate the function of the individual parts. This can be achieved by employing cleavable linkages in conjugates, which are responsive to chemical or enzymatic stimuli inside cells. In this overview we describe strategies, how such entities can be introduced into proteins and how selective intracellular cleavage can be accomplished.


Assuntos
Proteínas/metabolismo , Enzimas/metabolismo , Proteólise , Frações Subcelulares/enzimologia , Frações Subcelulares/metabolismo
7.
J Cell Biol ; 218(8): 2470-2480, 2019 08 05.
Artigo em Inglês | MEDLINE | ID: mdl-31227593

RESUMO

The endoplasmic reticulum (ER) is a key regulator of cellular proteostasis because it controls folding, sorting, and degradation of secretory proteins. Much has been learned about how environmentally triggered signaling pathways regulate ER function, but only little is known about local signaling at the ER. The identification of ER-resident signaling molecules will help gain a deeper understanding of the regulation of ER function and thus of proteostasis. Here, we show that leukocyte tyrosine kinase (LTK) is an ER-resident receptor tyrosine kinase. Depletion of LTK as well as its pharmacologic inhibition reduces the number of ER exit sites and slows ER-to-Golgi transport. Furthermore, we show that LTK interacts with and phosphorylates Sec12. Expression of a phosphoablating mutant of Sec12 reduces the efficiency of ER export. Thus, LTK-to-Sec12 signaling represents the first example of an ER-resident signaling module with the potential to regulate proteostasis.


Assuntos
Retículo Endoplasmático/metabolismo , Receptores Proteína Tirosina Quinases/metabolismo , Linhagem Celular , Fatores de Troca do Nucleotídeo Guanina/metabolismo , Humanos , Fosforilação , Ligação Proteica , Domínios Proteicos , Transporte Proteico , Receptores Proteína Tirosina Quinases/química , Frações Subcelulares/enzimologia
8.
Proc Natl Acad Sci U S A ; 116(27): 13305-13310, 2019 07 02.
Artigo em Inglês | MEDLINE | ID: mdl-31209052

RESUMO

Mycophenolic acid (MPA) from filamentous fungi is the first natural product antibiotic to be isolated and crystallized, and a first-line immunosuppressive drug for organ transplantations and autoimmune diseases. However, some key biosynthetic mechanisms of such an old and important molecule have remained unclear. Here, we elucidate the MPA biosynthetic pathway that features both compartmentalized enzymatic steps and unique cooperation between biosynthetic and ß-oxidation catabolism machineries based on targeted gene inactivation, feeding experiments in heterologous expression hosts, enzyme functional characterization and kinetic analysis, and microscopic observation of protein subcellular localization. Besides identification of the oxygenase MpaB' as the long-sought key enzyme responsible for the oxidative cleavage of the farnesyl side chain, we reveal the intriguing pattern of compartmentalization for the MPA biosynthetic enzymes, including the cytosolic polyketide synthase MpaC' and O-methyltransferase MpaG', the Golgi apparatus-associated prenyltransferase MpaA', the endoplasmic reticulum-bound oxygenase MpaB' and P450-hydrolase fusion enzyme MpaDE', and the peroxisomal acyl-coenzyme A (CoA) hydrolase MpaH'. The whole pathway is elegantly comediated by these compartmentalized enzymes, together with the peroxisomal ß-oxidation machinery. Beyond characterizing the remaining outstanding steps of the MPA biosynthetic steps, our study highlights the importance of considering subcellular contexts and the broader cellular metabolism in natural product biosynthesis.


Assuntos
Ácido Micofenólico/metabolismo , Aspergillus oryzae/metabolismo , Retículo Endoplasmático/metabolismo , Complexo de Golgi/metabolismo , Redes e Vias Metabólicas , Oxirredução , Penicillium/metabolismo , Peroxissomos/metabolismo , Frações Subcelulares/enzimologia , Frações Subcelulares/metabolismo
9.
Toxicol Lett ; 299: 47-55, 2018 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-30240590

RESUMO

Environmental exposure to the highly persistent chlorinated pesticides including dieldrin and lindane is postulated to be a risk factor to the development of Parkinson's disease, a devastating movement disorder. We have previously reported that the combined treatment with dieldrin and lindane induces a cooperative toxicity in the rat N27 dopaminergic neuronal cells through increased oxidative stress and mitochondrial dysfunction. In this study, we investigated the involvement of NADPH oxidase (NOX) proteins in the combined treatment with dieldrin and lindane-induced dopaminergic neurotoxicity. Immunoblot analysis demonstrated the presence of NADPH Oxidase 1 (Nox1) isoform and p67phox in N27 neurons. Furthermore, treatment with dieldrin and lindane upregulated the cellular expression of Nox1 but not p67phox protein. Functionally, dieldrin and lindane-induced ROS production was attenuated, in a dose-dependent manner, by Nox inhibitors diphenylene iodonium and apocynin. Subcellular localization analysis of Nox1 and p67phox proteins indicated colocalization of both subunits with mitochondria in untreated cells. Treatment with dieldrin and lindane further increased mitochondrial colocalization of Nox1 protein, suggesting a potentially prominent role for mitochondrial Nox1 protein in dieldrin and lindane-induced ROS generation in dopaminergic neurons and its contribution to the combined organochlorinated pesticide-induced neurotoxicity.


Assuntos
Dieldrin/toxicidade , Neurônios Dopaminérgicos/efeitos dos fármacos , Poluentes Ambientais/toxicidade , Hexaclorocicloexano/toxicidade , NADPH Oxidase 1/metabolismo , Espécies Reativas de Oxigênio/metabolismo , Animais , Técnicas de Cultura de Células , Linhagem Celular , Neurônios Dopaminérgicos/metabolismo , Sinergismo Farmacológico , Ratos , Frações Subcelulares/efeitos dos fármacos , Frações Subcelulares/enzimologia
10.
Biosci Biotechnol Biochem ; 82(12): 2072-2083, 2018 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-30122118

RESUMO

Sugar metabolism pathways such as photosynthesis produce dicarbonyls, e.g. methylglyoxal (MG), which can cause cellular damage. The glyoxalase (GLX) system comprises two enzymes GLX1 and GLX2, and detoxifies MG; however, this system is poorly understood in the chloroplast, compared with the cytosol. In the present study, we determined GLX1 and GLX2 activities in spinach chloroplasts, which constituted 40% and 10%, respectively, of the total leaf glyoxalase activity. In Arabidopsis thaliana, five GFP-fusion GLXs were present in the chloroplasts. Under high CO2 concentrations, where increased photosynthesis promotes the MG production, GLX1 and GLX2 activities in A. thaliana increased and the expression of AtGLX1-2 and AtGLX2-5 was enhanced. On the basis of these findings and the phylogeny of GLX in oxygenic phototrophs, we propose that the GLX system scavenges MG produced in chloroplasts during photosynthesis.


Assuntos
Proteínas de Arabidopsis/metabolismo , Dióxido de Carbono/farmacologia , Cloroplastos/efeitos dos fármacos , Cloroplastos/enzimologia , Lactoilglutationa Liase/metabolismo , Tioléster Hidrolases/metabolismo , Arabidopsis/efeitos dos fármacos , Arabidopsis/enzimologia , Arabidopsis/fisiologia , Proteínas de Arabidopsis/fisiologia , Lactoilglutationa Liase/classificação , Fotossíntese , Filogenia , Folhas de Planta/efeitos dos fármacos , Folhas de Planta/enzimologia , Folhas de Planta/fisiologia , Spinacia oleracea/metabolismo , Frações Subcelulares/enzimologia , Tioléster Hidrolases/classificação
11.
Proc Natl Acad Sci U S A ; 115(16): E3712-E3721, 2018 04 17.
Artigo em Inglês | MEDLINE | ID: mdl-29610352

RESUMO

We report the dynamic spatial organization of Caulobacter crescentus RNase E (RNA degradosome) and ribosomal protein L1 (ribosome) using 3D single-particle tracking and superresolution microscopy. RNase E formed clusters along the central axis of the cell, while weak clusters of ribosomal protein L1 were deployed throughout the cytoplasm. These results contrast with RNase E and ribosome distribution in Escherichia coli, where RNase E colocalizes with the cytoplasmic membrane and ribosomes accumulate in polar nucleoid-free zones. For both RNase E and ribosomes in Caulobacter, we observed a decrease in confinement and clustering upon transcription inhibition and subsequent depletion of nascent RNA, suggesting that RNA substrate availability for processing, degradation, and translation facilitates confinement and clustering. Importantly, RNase E cluster positions correlated with the subcellular location of chromosomal loci of two highly transcribed rRNA genes, suggesting that RNase E's function in rRNA processing occurs at the site of rRNA synthesis. Thus, components of the RNA degradosome and ribosome assembly are spatiotemporally organized in Caulobacter, with chromosomal readout serving as the template for this organization.


Assuntos
Proteínas de Bactérias/metabolismo , Caulobacter crescentus/enzimologia , Endorribonucleases/metabolismo , Proteínas de Bactérias/análise , Caulobacter crescentus/metabolismo , Caulobacter crescentus/ultraestrutura , Ciclo Celular , Polaridade Celular , Cromossomos Bacterianos/genética , Cromossomos Bacterianos/ultraestrutura , Endorribonucleases/análise , Regulação Bacteriana da Expressão Gênica , Proteínas Luminescentes/análise , Microscopia de Fluorescência/métodos , Complexos Multienzimáticos/metabolismo , Polirribonucleotídeo Nucleotidiltransferase/metabolismo , RNA Helicases/metabolismo , RNA Bacteriano/biossíntese , RNA Bacteriano/genética , RNA Ribossômico/biossíntese , RNA Ribossômico/genética , Ribossomos/metabolismo , Imagem Individual de Molécula/métodos , Frações Subcelulares/enzimologia , Moldes Genéticos , Transcrição Gênica
12.
Biochim Biophys Acta Gen Subj ; 1862(7): 1644-1655, 2018 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-29660372

RESUMO

BACKGROUND: Heparan sulfate (HS) 3-O-sulfation can be catalysed by seven 3-O-sulfotransferases (HS3STs) in humans, still it is the rarest modification in HS and its biological function is yet misunderstood. HS3ST2 and HS3ST3B exhibit the same activity in vitro. They are however differently expressed in macrophages depending on cell environment, which suggests that they may be involved in distinct cellular processes. Here, we hypothesized that both isozymes might also display distinct subcellular localizations. METHODS: The subcellular distribution of HS3ST2 and HS3ST3B was analysed by using overexpression systems in HeLa cells. The localization of endogenous HS3ST2 was confirmed by immunostaining in primary macrophages. RESULTS: We found that HS3ST3B was only localized in the Golgi apparatus and no difference between full-length enzyme and truncated construct depleted of its catalytic domain was observed. In contrast, HS3ST2 was clearly visualized at the plasma membrane. Its truncated form remained in the Golgi apparatus, meaning that the catalytic domain might support correct addressing of HS3ST2 to cell surface. Moreover, we found a partial co-localization of HS3ST2 with syndecan-2 in HeLa cells and primary macrophages. Silencing the expression of this proteoglycan altered the localization of HS3ST2, which suggests that syndecan-2 is required to address the isozyme outside of the Golgi apparatus. CONCLUSIONS: We demonstrated that HS3ST3B is a Golgi-resident isozyme, while HS3ST2 is addressed to the plasma membrane with syndecan-2. GENERAL SIGNIFICANCE: The membrane localization of HS3ST2 suggests that this enzyme may participate in discrete processes that occur at the cell surface.


Assuntos
Amidoidrolases/análise , Membrana Celular/enzimologia , Macrófagos/enzimologia , Proteínas de Membrana/análise , Sulfotransferases/análise , Amidoidrolases/genética , Células Cultivadas , Complexo de Golgi/enzimologia , Células HEK293 , Células HeLa , Humanos , Isoenzimas/análise , Proteínas de Membrana/genética , Microscopia de Fluorescência , Monócitos/citologia , RNA Interferente Pequeno/genética , Reação em Cadeia da Polimerase em Tempo Real , Frações Subcelulares/enzimologia , Sulfotransferases/genética , Sindecana-2/análise
13.
Artigo em Inglês | MEDLINE | ID: mdl-29567405

RESUMO

Peroxiredoxins (PRXs) are a family of antioxidant enzymes present in all domains of life. To date, the diversity and function of peroxiredoxins within animals have only been studied in a few model species. Thus, we sought to characterize peroxiredoxin diversity in cnidarians and to gain insight into their function in one cnidarian-the sea anemone Nematostella vectensis. Phylogenetic analysis using all six known PRX subfamilies (PRX1-4, PRX5, PRX6, PRXQ/AHPE1, TPX, BCP-PRXQ) revealed that like bilaterians, cnidarians contain representatives from three subfamilies (PRX1-4, PRX5, PRX6). Within the PRX1-4 subfamily, cnidarian sequences fall into two clades: PRX4, and a cnidarian-specific clade, which we term CNID-PRX. This phylogenetic analysis demonstrates that the three PRX subfamilies present in Bilateria were also present in the last common ancestor of the Cnidaria and Bilateria, and further that diversification of the PRX1-4 subfamily has occurred within the cnidarian lineage. We next examined the impact of decreased salinity, increased temperature, and peroxide exposure on the expression of four prx genes in N. vectensis (cnid-prx, prx4, prx5, and prx6). These genes exhibited unique expression patterns in response to these environmental stressors. Expression of prx4 decreased with initial exposure to elevated temperature, cnid-prx increased with exposure to elevated temperatures as well as with hydrogen peroxide exposure, and expression of all prxs transiently decreased with reduced salinity. Predicted subcellular localization patterns also varied among PRX proteins. Together these results provide evidence that peroxiredoxins in N. vectensis serve distinct physiological roles and lay a groundwork for understanding how peroxiredoxins mediate cnidarian developmental processes and environmental responses.


Assuntos
Estuários , Regulação da Expressão Gênica no Desenvolvimento , Regulação Enzimológica da Expressão Gênica , Peroxirredoxinas/classificação , Filogenia , Anêmonas-do-Mar/enzimologia , Estresse Fisiológico/genética , Animais , Antioxidantes/metabolismo , Evolução Molecular , Peróxido de Hidrogênio/metabolismo , Estresse Oxidativo , Peroxirredoxinas/química , Peroxirredoxinas/genética , Peroxirredoxinas/metabolismo , Conformação Proteica , Espécies Reativas de Oxigênio/metabolismo , Estresse Salino , Anêmonas-do-Mar/genética , Anêmonas-do-Mar/metabolismo , Anêmonas-do-Mar/fisiologia , Frações Subcelulares/enzimologia , Temperatura
14.
PLoS One ; 12(10): e0185416, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-29045428

RESUMO

Cellular responses to stress stem from a variety of different mechanisms, including translation arrest and relocation of the translationally repressed mRNAs to ribonucleoprotein particles like stress granules (SGs) and processing bodies (PBs). Here, we examine the role of PKA in the S. cerevisiae heat shock response. Under mild heat stress Tpk3 aggregates and promotes aggregation of eIF4G, Pab1 and eIF4E, whereas severe heat stress leads to the formation of PBs and SGs that contain both Tpk2 and Tpk3 and a larger 48S translation initiation complex. Deletion of TPK2 or TPK3 impacts upon the translational response to heat stress of several mRNAs including CYC1, HSP42, HSP30 and ENO2. TPK2 deletion leads to a robust translational arrest, an increase in SGs/PBs aggregation and translational hypersensitivity to heat stress, whereas TPK3 deletion represses SGs/PBs formation, translational arrest and response for the analyzed mRNAs. Therefore, this work provides evidence indicating that Tpk2 and Tpk3 have opposing roles in translational adaptation during heat stress, and highlight how the same signaling pathway can be regulated to generate strikingly distinct physiological outputs.


Assuntos
Subunidades Catalíticas da Proteína Quinase Dependente de AMP Cíclico/metabolismo , Resposta ao Choque Térmico , Biossíntese de Proteínas , Proteínas de Saccharomyces cerevisiae/metabolismo , Saccharomyces cerevisiae/enzimologia , Estresse Fisiológico , Proteínas Quinases Dependentes de AMP Cíclico/metabolismo , Grânulos Citoplasmáticos/metabolismo , Agregados Proteicos , Subunidades Proteicas/metabolismo , Frações Subcelulares/enzimologia
15.
PLoS One ; 12(10): e0186620, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-29045501

RESUMO

The mechanism of action of histone deacetylase inhibitors (HDACi) is mainly attributed to the inhibition of the deacetylase catalytic activity for their histone substrates. In this study, we analyzed the abundance of class I HDACs in the cytosolic, nuclear soluble and chromatin bound cellular fractions in breast cancer cells after HDACi treatment. We found that potent N-hydroxy propenamide-based HDACi induced a concentration dependent decrease in the HDAC1 associated with chromatin and a lasting concomitant increase in cytoplasmic HDAC1 while maintaining total protein expression. No such change occurred with HDAC2 or 8, however, an increase in cytoplasmic non-phosphorylated HDAC3 was also observed. The subcellular re-equilibration of HDAC1 was subsequent to the accumulation of acetylated histones and might be cell cycle dependent. This study suggests that the biological activity of a subset of N-hydroxy propenamide-based HDACi may stem from direct competition with histone substrates of HDACs as well as from spatial separation from their substrates in the nucleus and/or change in post-translational modification status of HDACs.


Assuntos
Inibidores de Histona Desacetilases/farmacologia , Histona Desacetilases/metabolismo , Processamento de Proteína Pós-Traducional/efeitos dos fármacos , Acetilação/efeitos dos fármacos , Citosol/efeitos dos fármacos , Citosol/enzimologia , Inibidores de Histona Desacetilases/química , Histonas/metabolismo , Humanos , Células MCF-7 , Microscopia Confocal , Mitógenos/farmacologia , Modelos Biológicos , Fosforilação/efeitos dos fármacos , Transporte Proteico/efeitos dos fármacos , Frações Subcelulares/efeitos dos fármacos , Frações Subcelulares/enzimologia
16.
J Vis Exp ; (127)2017 09 25.
Artigo em Inglês | MEDLINE | ID: mdl-28994791

RESUMO

Mitochondrial-derived peptides (MDPs) are a new class of peptides that are encoded by small open reading frames within other known genes of the mitochondrial genome. MDPs have a wide variety of biological effects such as protecting neurons from apoptosis, improving metabolic markers, and protecting cells from chemotherapy. Humanin was the first MDP to be discovered and is the most studied peptide among the MDP family. The membrane receptors and downstream signaling pathways of humanin have been carefully characterized. Additional MDPs such as MOTS-c and SHLP1-6 have been more recently discovered and the signaling mechanisms have yet to be elucidated. Here we describe a cell culture based method to determine the function of these peptides. In particular, cell fractionation techniques in combination with western blotting allow for the quantitative determination of activation and translocation of important signaling molecule. While there are other methods of cell fractionation, the one described here is an easy and straightforward method. These methods can be used to further elucidate the mechanism of action of these peptides and other therapeutic agents.


Assuntos
Sistema de Sinalização das MAP Quinases/efeitos dos fármacos , Mitocôndrias/metabolismo , Peptídeos/farmacologia , Células HEK293 , Humanos , Peptídeos e Proteínas de Sinalização Intracelular/química , Peptídeos e Proteínas de Sinalização Intracelular/farmacologia , Mitocôndrias/química , Mitocôndrias/enzimologia , Peptídeos/metabolismo , Frações Subcelulares/enzimologia , Frações Subcelulares/metabolismo
17.
Neuroreport ; 28(18): 1208-1214, 2017 Dec 13.
Artigo em Inglês | MEDLINE | ID: mdl-28957946

RESUMO

The multifunctional protein transglutaminase 2 (TG2) has been widely implicated as a modulator of cellular viability. Specifically, TG2 expression is beneficial to neuronal survival following an ischemic injury, whereas the opposite is true in astrocytes. Furthermore, its role in mediating cell death and survival processes has been suggested to be dependent on its subcellular localization. Therefore, the aim of this study was to examine the subcellular localization patterns of neuronal and astrocytic TG2 in ischemia-relevant conditions. We found that nuclear levels of TG2 were significantly increased in neurons, but reduced in astrocytes, in response to hypoxia. In addition, there were no changes in extracellular TG2 in astrocytes exposed to hypoxia. Thus, these findings demonstrate a difference in the subcellular localization pattern of TG2 in neurons and astrocytes in ischemia-relevant conditions and provide further avenues for investigation into the role of TG2 in mediating cellular viability.


Assuntos
Astrócitos/ultraestrutura , Proteínas de Ligação ao GTP/metabolismo , Hipóxia/patologia , Neurônios/ultraestrutura , Frações Subcelulares/enzimologia , Transglutaminases/metabolismo , Animais , Animais Recém-Nascidos , Biotinilação , Núcleo Celular/enzimologia , Células Cultivadas , Córtex Cerebral , Meios de Cultura Livres de Soro , Citosol/enzimologia , Feminino , Hipóxia/fisiopatologia , Camundongos , Gravidez , Proteína 2 Glutamina gama-Glutamiltransferase , Ratos , Ratos Sprague-Dawley
18.
Drug Metab Dispos ; 45(12): 1245-1259, 2017 12.
Artigo em Inglês | MEDLINE | ID: mdl-28939686

RESUMO

Aldehyde oxidase (AO) and xanthine oxidase (XO) are molybdo-flavoenzymes that catalyze oxidation of aromatic azaheterocycles. Differences in AO activity have been reported among various species, including rats, humans, and monkeys. Herein we report a species difference in the enzymes responsible for the metabolism of the negative allosteric modulator of metabotropic glutamate receptor subtype 5 (mGlu5 NAM) VU0424238 (VU238, auglurant). Hepatic S9 incubations with AO and XO specific inhibitors hydralazine and allopurinol indicated that rats and cynomolgus monkeys both oxidized VU238 to the 6-oxopyrimidine metabolite M1 via an AO-mediated pathway, whereas secondary oxidation to the 2,6-dioxopyrimidine metabolite M2 was mediated predominantly by AO in monkeys and XO in rats. Despite differences in enzymatic pathways, intrinsic clearance (CLint) of M1 was similar between species (cynomolgus and rat CLint = 2.00 ± 0.040 and 2.19 ± 0.201 µl/min per milligram of protein, respectively). Inhibitor studies in the S9 of multiple species indicated that oxidation of VU238 to M1 was mediated predominantly by AO in humans, cynomolgus and rhesus monkeys, rats, mice, guinea pigs, and minipigs. Oxidation of M1 to M2 was mediated predominantly by XO in rats and mice and by AO in monkeys and guinea pigs, whereas low turnover prevented enzyme phenotyping in humans and minipigs. Additionally, inhibitor experiments indicated that oxidation at the 2-position of the pyrimidine ring of the known AO substrate, BIBX1382, was mediated by AO in all species, although production of this metabolite was comparatively low in rats and mice. These data may suggest low reactivity of rat AO toward 2-oxidation of pyrimidine-containing compounds and highlight the importance of thoroughly characterizing AO-metabolized drug candidates in multiple preclinical species.


Assuntos
Aldeído Oxidase/metabolismo , Aminopiridinas/metabolismo , Ácidos Picolínicos/metabolismo , Receptor de Glutamato Metabotrópico 5/efeitos dos fármacos , Xantina Oxidase/metabolismo , Aldeído Oxidase/antagonistas & inibidores , Aminopiridinas/farmacocinética , Animais , Inibidores Enzimáticos/farmacologia , Cobaias , Fígado/enzimologia , Macaca fascicularis , Macaca mulatta , Camundongos , Oxirredução , Ácidos Picolínicos/farmacocinética , Ratos , Especificidade da Espécie , Frações Subcelulares/enzimologia , Suínos , Porco Miniatura , Xantina Oxidase/antagonistas & inibidores
19.
Neuromolecular Med ; 19(4): 518-524, 2017 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-28866774

RESUMO

Despite reports implicating disrupted purine metabolism in causing a wide spectrum of neurological defects, the mechanistic details of purine biosynthesis in neurons are largely unknown. As an initial step in filling that gap, we examined the expression and subcellular distribution of three purine biosynthesis enzymes (PFAS, PAICS and ATIC) in rat hippocampal neurons. Using immunoblotting and high-resolution light and electron microscopic analysis, we find that all three enzymes are broadly distributed in hippocampal neurons with pools of these enzymes associated with mitochondria. These findings suggest a potential link between purine metabolism and mitochondrial function in neurons and provide an impetus for further studies.


Assuntos
Hipocampo/metabolismo , Neurônios/metabolismo , Purinas/biossíntese , Animais , Carbono-Nitrogênio Ligases com Glutamina como Doadora de N-Amida/análise , Células Cultivadas , Células HeLa , Hipocampo/citologia , Hipocampo/embriologia , Humanos , Hidroximetil e Formil Transferases/análise , Microscopia Eletrônica , Microscopia de Fluorescência , Mitocôndrias/enzimologia , Complexos Multienzimáticos/análise , Proteínas do Tecido Nervoso/análise , Neurônios/enzimologia , Neurônios/ultraestrutura , Nucleotídeo Desaminases/análise , Peptídeo Sintases/análise , Cultura Primária de Células , Ratos , Frações Subcelulares/enzimologia
20.
Physiol Plant ; 161(3): 372-384, 2017 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-28766720

RESUMO

Arsenic (As) accumulation adversely affects the growth and productivity of plants and poses a serious threat to human health and food security. In this study, we identified one As-responsive Really Interesting New Gene (RING) E3 ubiquitin ligase gene from rice root tissues during As stress. We named it Oryza sativa As-Induced RING E3 ligase 2 (OsAIR2). Expression of OsAIR2 was induced under various abiotic stress conditions, including heat, salt, drought and As exposure. Results of an in vitro ubiquitination assay showed that OsAIR2 possesses an E3 ligase activity. Within the cell, OsAIR2 was found to be localized to the Golgi apparatus. Using yeast two-hybrid (Y2H) assay, the 3-ketoacyl-CoA thiolase (KAT) protein was identified as an interaction partner. We found that the O. sativa KAT1 (OsKAT1) is localized to the cytosol and peroxisomes. Moreover, in vitro pull-down assay verified the physical interaction between OsAIR2 and OsKAT1. Interestingly, in vitro ubiquitination assay and in vivo proteasomal degradation assay revealed that OsAIR2 ubiquitinates OsKAT1 and promotes the degradation of OsKAT1 via the 26S proteasome degradation pathway. Heterogeneous overexpression of OsAIR2 in Arabidopsis improved the seed germination and increased the root length under arsenate stress conditions. Therefore, these results suggest that OsAIR2 may be associated with the plant response to As stress and acts as a positive regulator of As stress tolerance.


Assuntos
Arabidopsis/genética , Arsênio/toxicidade , Oryza/enzimologia , Proteínas de Plantas/metabolismo , Ubiquitina-Proteína Ligases/metabolismo , Regulação da Expressão Gênica de Plantas/efeitos dos fármacos , Oryza/efeitos dos fármacos , Oryza/genética , Filogenia , Proteínas de Plantas/genética , Plantas Geneticamente Modificadas , Ligação Proteica/efeitos dos fármacos , Estresse Fisiológico/efeitos dos fármacos , Estresse Fisiológico/genética , Frações Subcelulares/efeitos dos fármacos , Frações Subcelulares/enzimologia , Ubiquitinação/efeitos dos fármacos
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